OpenHCS
Inspect, author, validate, and run high-content microscopy workflows.
Install
registry version 0.8.6
Python
uvx openhcsPython
uvx openhcs@0.8.6
Setup by client
Pick your client — the config below is generated for this server (local stdio). Copy respects the “Pin version” switch above.
claude_desktop_config.json
{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs"
]
}
}
}{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs@0.8.6"
]
}
}
}Format verified against the official Claude Desktop docs ↗.
terminal
claude mcp add openhcs -- uvx openhcs
claude mcp add openhcs -- uvx openhcs@0.8.6
Format verified against the official Claude Code docs ↗.
.cursor/mcp.json
{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs"
]
}
}
}{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs@0.8.6"
]
}
}
}Format verified against the official Cursor docs ↗.
.vscode/mcp.json
{
"servers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs"
]
}
}
}{
"servers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs@0.8.6"
]
}
}
}Format verified against the official VS Code docs ↗.
mcp_config.json
{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs"
]
}
}
}{
"mcpServers": {
"openhcs": {
"command": "uvx",
"args": [
"openhcs@0.8.6"
]
}
}
}Format verified against the official Windsurf docs ↗.
GitHub
⭐ 6 stars · 最近更新于 17 天前 · MIT license
About this server
OpenHCS Turn high content microscopy images into reproducible measurements \ One reviewable workflow across the GUI, Pytho…
Summary from the project README — github.com/OpenHCSDev/OpenHCS
Distributed as Python, listed under Developer Tools. Review our MCP security guide before granting access to real data.
Frequently asked questions
What does the OpenHCS MCP server do?
OpenHCS Turn high content microscopy images into reproducible measurements \ One reviewable workflow across the GUI, Pytho
How do I install OpenHCS?
Run the install command shown above, then paste the config for your client (Claude Desktop, Claude Code, Cursor, VS Code or Windsurf) into its MCP settings and restart the client.
Is OpenHCS free to use?
The MCP server itself is free to install. The source is public on https://github.com/OpenHCSDev/OpenHCS. Any third-party service it calls may require its own API key and account.
Which clients support OpenHCS?
Any MCP-compatible client can use it, including Claude Desktop, Claude Code, Cursor, VS Code, Windsurf and custom agents.
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