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Gprofiler

MCP server · by pipeworx-io

Developer Tools Streamable HTTP v0.1.1

g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…

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Install

Run one of the commands below, then add the client config underneath.

Streamable HTTPhttps://gateway.pipeworx.io/gprofiler/mcp

Client configuration

Paste into Claude Desktop, Cursor (mcp.json), VS Code or any MCP client, then restart the client.

mcpServers{
  "mcpServers": {
    "gprofiler": {
      "url": "https://gateway.pipeworx.io/gprofiler/mcp"
    }
  }
}

About this server

Gprofiler is listed in the Developer Tools category of the MCPNav directory. It is distributed as Streamable HTTP and can be loaded by any client that speaks the Model Context Protocol.

Typical uses include giving your assistant scoped access to the corresponding service so it can answer questions and take actions with real data instead of guessing. Always review what a server can access before you enable it — see our MCP security guide.

Frequently asked questions

What is the Gprofiler MCP server?

Gprofiler is an MCP server by pipeworx-io. g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…

How do I install Gprofiler?

Install it with: https://gateway.pipeworx.io/gprofiler/mcp. Then add the JSON config to your client's MCP settings and restart the client.

Is Gprofiler free to use?

The MCP server itself is free to install. The source is public on https://github.com/pipeworx-io/mcp-gprofiler. Any third-party API it calls (such as a search or maps API) may require its own key and billing.

Which clients support Gprofiler?

Any MCP-compatible client can use it, including Claude Desktop, Cursor, VS Code, Windsurf and custom agents.